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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910621.1_cds_XP_016460659.1_54060
CDS Infomation

[gene=LOC107784099] [db_xref=GeneID:107784099] [protein=uncharacterized protein LOC107784099 isoform X6] [protein_id=XP_016460659.1] [location=join(53016..53171,54240..54314,54401..54610,54680..54781,56872..57102,57222..57302,59739..59822,59908..60093,60177..60332,61364..61456,61919..61990,62630..62747,63557..63729,64744..64846,65227..65364,67243..67349,67509..67586,67662..67757,68620..68715,68811..68994,69603..69772)] [gbkey=CDS]
Sequence

ATGGATGCTCTTATTCGGCGAAAGTTGGTGCGCTTGGCTTCTGGGAAATCATTTGGACAG
ATCGATGTTGCTCAAATCGCACTGGGGCTTTTGAATGGCACAATGAAGTCTGAATTTCAG
AATGAGAAGTCATATATCCAATGGAAGAACAGACAAGCTAATATCCTTGAAGAACTTTTA
TCTGCTGAGCAATCAGTTGGAACACTTTTTGCAAAGATTAGGAACTTTGAGGAATGGGAC
ATTAAGATGTCTCCCTCTGAATGCAGAGATGTGCTATTTTCCATTAGAAATGTTGCTTTG
ACGTTGTCATCTATGCCTGGGAATCTGGGTATACAAGGCGAGACATATTACTGGAGTGCT
GGTTATCCCTTTAACATAAGGCTGTATCAGAAGCTACTCCTTGGTGTATTTGACATTCTG
GAAGATGGCCGGCTTATAGAGGAAGCTGATGAAATCCTAAAGCTCATCAAATCAACATGG
CCTTTGTTGGGCATTACCCAGAAGTTACATGATGTGTTATATGGATGGGTGCTTTTTCAG
CAGTTTGTTGGGACAGAGGAGGCAATGCTTTTGGACTATGCAGTTCGTAAAGTGCGGAAT
ATTCTGTCACCTGAAGATGCTGGAAAGAAGGAAACAAAGTATTTGGAGAGCCTAGTTTGT
TGTACTCACCAAAATGGGTCTGAGATTAGGCTAAATTTGGTGCAATCTATCCTTTGGTCA
ATTAGTTTATGGTGTGACAACAAGTTACTGGATTATCATTGGCATTTTCGTCAGAAGCCT
TGTCTTTTCAAGGGGGTGTTATCCATGGCATTGGTGGCAGGAAATCAGAAGTTCGATGCG
TCTGGAAATATGGAGCTGATGCTCGATGCTTCAGATGAGATCATTGCTAGCAAAGTCAGA
ATGTATGCTGAGAGGTCTGCAGAAGCTGCTTGCAACAGGGTTACTGGTGCAATAAATGCT
GGATCTAAAGTAGATAAGAAACATCCTTTAGCTTTGCTTGCAAGTGAATTGAAATCAATT
GCTGAGAAACAGTTAACTGTGTACCATCCGGTCCTCAGGCATTGGTGTGCTGAAGCTGGA
GTAGTCTCAGCTTTGAAATTGCACAGATTTTATGGTGAAAGACTGGAGCCATTTCTCAAG
AATATATCTTGCCTTTCCGAAGATGTGAAACAGGTGCTTGCTGCAGCTATTCTATTGGAG
AATTATCTCCTTGAGCTCCATTCATCAGAACGAGTAGAAAATGGCGTGCATTCCCCATTG
ATGTTAGACTTTGAGCGTAAGATTGGAGAAATTGCAAGGCCAATTATTCTTGATTGGGTG
ATTGCTCAACATGCGAGGATACTTGAATGGACTGGGCGTGCTGCTGATCTCGAGGACTGG
GAACCCCTATCACATCAGCAGAAACAAGCAGCTTCAGCTGTAGAAGTATTTAGAATTATA
GAGGAGACTATTGATCAATTTTTTGAGCTGAGGCTTCCAGTGGATATCACGCACTTGCAG
GCTTTGCTTTCCATAATATTTCACACGTTGGATGCCTACTTGCAAAAAGTGGTTAACCAG
TTAGTGGACAATCACAATCTTTATCCTCCTGCTCCTCCCTTGACTCGTTACAAGGAGATG
GCATTTCCGAGCGCCAAGAAAAAGTTGGTTGAATCTGTTGTTCTTGATAATGCGGTGAAT
AAGAAGTTGGAGGCCTTGACAACTTCCAAGCTTTGTGTCAGAATGAACACCCTTCAACGA
TACTTTCTCATGCAGTATATGCAGAAGAAAATTTCCACTCTTGAGGATGGTATTAGGGAG
TCGTGGTCGGCTGTTAGACTTTTTAAAAATCAGACATGCCCTGATGTGGATTCTCGTTGG
ACTTCGAATGGGATTTTGGAAATGTGTAGCGAATCAGTCGATGAGCTTTTTGTTGCCACC
TTTGACTGCATCCGAGATAGTGCCGCTGATGCTATCAGGAAAACTTGTGAGTTAGTGGGA
GCTAGAGTTATGTTTTGGGACTTGAGAGAACCATTCATATTTAATTTATATCACGGTGGT
GTTGAAGGTGCACGACTGGAAACTATGCTTCCACAGTTTGATAGAGTCCTCAATAATGTT
TGCGCTCTGATTGATGACACCCTCAGAGACATTGTAGTGAAAAGTATTTTTAAGGCATCT
CTGGAAGGTTATGCTTGGGTGTTACTAGATGGAGGGCCTTCACGTGCATTTTCTGATTTT
GATGTTGTCATGATGGAAGATGACCTCAATATATTAAAAGACTTGTTTGTTGCTGAGGGA
GAAGGGCTTCCCCGATCACTAGTTGAAGAGGAAGCAAGATTCGCTCATCAAATCCTCAGT
TTATTTTCTCTCCGGGCTGAATCTGTGATCCAATTGTTGATGACTTCTAGTGAACACAGT
TCAATAGGACTTGAAGCACATAAATTTGGGCACAGACATCTGGGAGATGCACACACCTTG
ATACGTGTTTTATGTCACAAGAAGGAGAGAGAAGCTTCGAAATTCTTGAAGCTGCATTAT
CACCTTCCAGCATCATCAGTGTACGATGAAGCTGCAGTGGAGGACGCCTCTGTGAAGTCG
CCACTTATGGCAGATCTTATTAAAAGGAGTGCTTCGTTTCGTTGGTCTGACAAAGGAAGT
AGCAGTTTCAGATCTTTAAAGAAGAAAATCCAGGAAGCAACATCAGATTTTAGGCATGTG
GGATGGTGA

Peptide Sequence

PEP ID

XP_016460659.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107784099 isoform X6 [Nicotiana tabacum]
Sequence

MDALIRRKLVRLASGKSFGQIDVAQIALGLLNGTMKSEFQNEKSYIQWKNRQANILEELL
SAEQSVGTLFAKIRNFEEWDIKMSPSECRDVLFSIRNVALTLSSMPGNLGIQGETYYWSA
GYPFNIRLYQKLLLGVFDILEDGRLIEEADEILKLIKSTWPLLGITQKLHDVLYGWVLFQ
QFVGTEEAMLLDYAVRKVRNILSPEDAGKKETKYLESLVCCTHQNGSEIRLNLVQSILWS
ISLWCDNKLLDYHWHFRQKPCLFKGVLSMALVAGNQKFDASGNMELMLDASDEIIASKVR
MYAERSAEAACNRVTGAINAGSKVDKKHPLALLASELKSIAEKQLTVYHPVLRHWCAEAG
VVSALKLHRFYGERLEPFLKNISCLSEDVKQVLAAAILLENYLLELHSSERVENGVHSPL
MLDFERKIGEIARPIILDWVIAQHARILEWTGRAADLEDWEPLSHQQKQAASAVEVFRII
EETIDQFFELRLPVDITHLQALLSIIFHTLDAYLQKVVNQLVDNHNLYPPAPPLTRYKEM
AFPSAKKKLVESVVLDNAVNKKLEALTTSKLCVRMNTLQRYFLMQYMQKKISTLEDGIRE
SWSAVRLFKNQTCPDVDSRWTSNGILEMCSESVDELFVATFDCIRDSAADAIRKTCELVG
ARVMFWDLREPFIFNLYHGGVEGARLETMLPQFDRVLNNVCALIDDTLRDIVVKSIFKAS
LEGYAWVLLDGGPSRAFSDFDVVMMEDDLNILKDLFVAEGEGLPRSLVEEEARFAHQILS
LFSLRAESVIQLLMTSSEHSSIGLEAHKFGHRHLGDAHTLIRVLCHKKEREASKFLKLHY
HLPASSVYDEAAVEDASVKSPLMADLIKRSASFRWSDKGSSSFRSLKKKIQEATSDFRHV
GW

Transcript Sequence

Gene sequence data has not been registered.